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sweepLink documentation
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Getting Started

  • Installation
  • Tutorial
    • Step 1: Preparing the Input
    • Step 2: Inference
    • Step 3: Results
    • Step 4: Refining
  • Using your own data

User Manual

  • How it works
  • sweepLink tasks
    • Inference
    • Simulation
    • Likelihood surfaces
  • Companion scripts
    • sweeplink-vcf2input
    • sweeplink-extract
    • sweeplink-plot
    • sweeplink-plot-posteriors
  • File formats
  • FAQ
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